IL_7U2J_056

3D structure

PDB id

7U2J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, peptidyl P-site fMAC-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

CUAG*CGAAG

Length

9 nucleotides

Bulged bases

7U2J|1|1A|A|1554

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7U2J_056 not in the Motif Atlas

Geometric match to IL_7RQB_057

Geometric discrepancy: 0.0497

The information below is about IL_7RQB_057

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_04059.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

7U2J|1|1A|C|1437
7U2J|1|1A|U|1438
7U2J|1|1A|A|1439
7U2J|1|1A|G|1440
*
7U2J|1|1A|C|1551
7U2J|1|1A|G|1552
7U2J|1|1A|A|1553
7U2J|1|1A|A|1554
7U2J|1|1A|G|1555

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains