IL_7U2J_137
3D structure
- PDB id
- 7U2J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, peptidyl P-site fMAC-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.55 Å
Loop
- Sequence
- UGUAG*UGAGG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7U2J_137 not in the Motif Atlas
- Homologous match to IL_4LFB_023
- Geometric discrepancy: 0.0951
- The information below is about IL_4LFB_023
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_05821.1
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 17
Unit IDs
7U2J|1|1a|U|580
7U2J|1|1a|G|581
7U2J|1|1a|U|582
7U2J|1|1a|A|583
7U2J|1|1a|G|584
*
7U2J|1|1a|U|757
7U2J|1|1a|G|758
7U2J|1|1a|A|759
7U2J|1|1a|G|760
7U2J|1|1a|G|761
Current chains
- Chain 1a
- 16S Ribosomal RNA
Nearby chains
- Chain 1A
- Large subunit ribosomal RNA; LSU rRNA
- Chain 1l
- 30S ribosomal protein S12
- Chain 1o
- 30S ribosomal protein S15
- Chain 1q
- 30S ribosomal protein S17
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