IL_7U2J_225

3D structure

PDB id

7U2J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, peptidyl P-site fMAC-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

CGAUG*CUAAG

Length

10 nucleotides

Bulged bases

7U2J|1|2A|U|1420

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7U2J_225 not in the Motif Atlas

Geometric match to IL_7RQB_055

Geometric discrepancy: 0.0935

The information below is about IL_7RQB_055

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_89002.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

20

Unit IDs

7U2J|1|2A|C|1417
7U2J|1|2A|G|1418
7U2J|1|2A|A|1419
7U2J|1|2A|U|1420
7U2J|1|2A|G|1421
*
7U2J|1|2A|C|1577
7U2J|1|2A|U|1578
7U2J|1|2A|A|1579
7U2J|1|2A|A|1580
7U2J|1|2A|G|1581

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains