IL_7UCJ_090
3D structure
- PDB id
- 7UCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S translation initiation complex with mRNA and Harringtonine
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- G(7MG)G*CCC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UCJ_090 not in the Motif Atlas
- Geometric match to IL_2ET8_001
- Geometric discrepancy: 0.1153
- The information below is about IL_2ET8_001
- Detailed Annotation
- Stack and bulge
- Broad Annotation
- Stack and bulge
- Motif group
- IL_53541.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 12
Unit IDs
7UCJ|1|5|G|2521
7UCJ|1|5|7MG|2522
7UCJ|1|5|G|2523
*
7UCJ|1|5|C|2532
7UCJ|1|5|C|2533
7UCJ|1|5|C|2534
Current chains
- Chain 5
- 28s rRNA
Nearby chains
- Chain R
- 60S ribosomal protein L19
- Chain X
- 60S ribosomal protein L23a
- Chain g
- 60S ribosomal protein L34
- Chain k
- 60S ribosomal protein L38
Coloring options: