IL_7UCJ_130
3D structure
- PDB id
- 7UCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S translation initiation complex with mRNA and Harringtonine
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GACC*GC
- Length
- 6 nucleotides
- Bulged bases
- 7UCJ|1|5|C|4349
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UCJ_130 not in the Motif Atlas
- Geometric match to IL_5J7L_032
- Geometric discrepancy: 0.2698
- The information below is about IL_5J7L_032
- Detailed Annotation
- Single stack bend
- Broad Annotation
- No text annotation
- Motif group
- IL_26793.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 16
Unit IDs
7UCJ|1|5|G|4347
7UCJ|1|5|A|4348
7UCJ|1|5|C|4349
7UCJ|1|5|C|4350
*
7UCJ|1|5|G|4364
7UCJ|1|5|C|4365
Current chains
- Chain 5
- 28s rRNA
Nearby chains
- Chain L
- 60S ribosomal protein L13
- Chain Q
- 60S ribosomal protein L18
- Chain a
- 60S ribosomal protein L27a
- Chain o
- 60S ribosomal protein L36a
Coloring options: