IL_7UCJ_147
3D structure
- PDB id
- 7UCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S translation initiation complex with mRNA and Harringtonine
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UGUA(PSU)(OMG)U*GCGAAG
- Length
- 13 nucleotides
- Bulged bases
- 7UCJ|1|5|U|4634
- QA status
- Modified nucleotides: PSU, OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UCJ_147 not in the Motif Atlas
- Geometric match to IL_3BBM_001
- Geometric discrepancy: 0.2905
- The information below is about IL_3BBM_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_47352.1
- Basepair signature
- cWW-cWW-L-R-tHS-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
7UCJ|1|5|U|4632
7UCJ|1|5|G|4633
7UCJ|1|5|U|4634
7UCJ|1|5|A|4635
7UCJ|1|5|PSU|4636
7UCJ|1|5|OMG|4637
7UCJ|1|5|U|4638
*
7UCJ|1|5|G|4661
7UCJ|1|5|C|4662
7UCJ|1|5|G|4663
7UCJ|1|5|A|4664
7UCJ|1|5|A|4665
7UCJ|1|5|G|4666
Current chains
- Chain 5
- 28s rRNA
Nearby chains
- Chain B
- 60S ribosomal protein L3
- Chain W
- Ribosomal protein L24
- Chain d
- 60S ribosomal protein L31
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