IL_7UCK_073

3D structure

PDB id

7UCK (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S translation initiation complex with ac4c(-1) mRNA and Harringtonine

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

UUAA(P7G)G*CCCAUA

Length

12 nucleotides

Bulged bases

7UCK|1|5|U|2070

QA status

Modified nucleotides: P7G

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7UCK|1|5|U|1905
7UCK|1|5|U|1906
7UCK|1|5|A|1907
7UCK|1|5|A|1908
7UCK|1|5|P7G|1909
7UCK|1|5|G|1910
*
7UCK|1|5|C|2066
7UCK|1|5|C|2067
7UCK|1|5|C|2068
7UCK|1|5|A|2069
7UCK|1|5|U|2070
7UCK|1|5|A|2071

Current chains

Chain 5

28s rRNA

Nearby chains

Chain 7

5S ribosomal RNA; 5S rRNA

Chain F

60S ribosomal protein L7

Chain Q

60S ribosomal protein L18

Chain e

60S ribosomal protein L32

Chain f

60S ribosomal protein L35a