IL_7UCK_099
3D structure
- PDB id
- 7UCK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S translation initiation complex with ac4c(-1) mRNA and Harringtonine
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- UGGAAUG*CGAGAGA
- Length
- 14 nucleotides
- Bulged bases
- 7UCK|1|5|U|2661, 7UCK|1|5|A|2674
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UCK_099 not in the Motif Atlas
- Homologous match to IL_8C3A_079
- Geometric discrepancy: 0.1524
- The information below is about IL_8C3A_079
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_60192.2
- Basepair signature
- cWW-tSH-tSH-tSS-tHS-L-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
7UCK|1|5|U|2656
7UCK|1|5|G|2657
7UCK|1|5|G|2658
7UCK|1|5|A|2659
7UCK|1|5|A|2660
7UCK|1|5|U|2661
7UCK|1|5|G|2662
*
7UCK|1|5|C|2672
7UCK|1|5|G|2673
7UCK|1|5|A|2674
7UCK|1|5|G|2675
7UCK|1|5|A|2676
7UCK|1|5|G|2677
7UCK|1|5|A|2678
Current chains
- Chain 5
- 28s rRNA
Nearby chains
- Chain NN
- 40S ribosomal protein S13
- Chain R
- 60S ribosomal protein L19
- Chain Z
- 60S ribosomal protein L27
- Chain c
- 60S ribosomal protein L30
- Chain g
- 60S ribosomal protein L34
- Chain p
- 60S ribosomal protein L37a
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