IL_7UCK_196
3D structure
- PDB id
- 7UCK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S translation initiation complex with ac4c(-1) mRNA and Harringtonine
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- GGG*CGAUUC
- Length
- 9 nucleotides
- Bulged bases
- 7UCK|1|9|U|428
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UCK_196 not in the Motif Atlas
- Geometric match to IL_4V88_404
- Geometric discrepancy: 0.1406
- The information below is about IL_4V88_404
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_11347.3
- Basepair signature
- cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
7UCK|1|9|G|411
7UCK|1|9|G|412
7UCK|1|9|G|413
*
7UCK|1|9|C|424
7UCK|1|9|G|425
7UCK|1|9|A|426
7UCK|1|9|U|427
7UCK|1|9|U|428
7UCK|1|9|C|429
Current chains
- Chain 9
- 18S rRNA
Nearby chains
- Chain EE
- 40S ribosomal protein S4
- Chain JJ
- 40S ribosomal protein S9
- Chain XX
- 40S ribosomal protein S23
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