IL_7UCK_278
3D structure
- PDB id
- 7UCK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S translation initiation complex with ac4c(-1) mRNA and Harringtonine
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- UUAA(P7G)*CCAUA
- Length
- 10 nucleotides
- Bulged bases
- 7UCK|1|5|U|2070
- QA status
- Modified nucleotides: P7G
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UCK_278 not in the Motif Atlas
- Homologous match to IL_8C3A_051
- Geometric discrepancy: 0.1139
- The information below is about IL_8C3A_051
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.4
- Basepair signature
- cWW-tWH-cWW-L-cWW-tHS
- Number of instances in this motif group
- 15
Unit IDs
7UCK|1|5|U|1905
7UCK|1|5|U|1906
7UCK|1|5|A|1907
7UCK|1|5|A|1908
7UCK|1|5|P7G|1909
*
7UCK|1|5|C|2067
7UCK|1|5|C|2068
7UCK|1|5|A|2069
7UCK|1|5|U|2070
7UCK|1|5|A|2071
Current chains
- Chain 5
- 28s rRNA
Nearby chains
- Chain 7
- 5S ribosomal RNA; 5S rRNA
- Chain F
- 60S ribosomal protein L7
- Chain Q
- 60S ribosomal protein L18
- Chain e
- 60S ribosomal protein L32
- Chain f
- 60S ribosomal protein L35a
Coloring options: