IL_7UCK_287

3D structure

PDB id

7UCK (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S translation initiation complex with ac4c(-1) mRNA and Harringtonine

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CAUUG*CCAAGCG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7UCK|1|5|C|4466
7UCK|1|5|A|4467
7UCK|1|5|U|4468
7UCK|1|5|U|4469
7UCK|1|5|G|4470
*
7UCK|1|5|C|4485
7UCK|1|5|C|4486
7UCK|1|5|A|4487
7UCK|1|5|A|4488
7UCK|1|5|G|4489
7UCK|1|5|C|4490
7UCK|1|5|G|4491

Current chains

Chain 5

28s rRNA

Nearby chains

Chain B

60S ribosomal protein L3

Chain H

60S ribosomal protein L9

Chain O

60S ribosomal protein L13a

Chain V

60S ribosomal protein L23

Chain m

60S ribosomal protein L40