IL_7UCK_298
3D structure
- PDB id
- 7UCK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S translation initiation complex with ac4c(-1) mRNA and Harringtonine
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- GACAGGAUUG*CUCGAUUC
- Length
- 18 nucleotides
- Bulged bases
- 7UCK|1|9|G|1285
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UCK_298 not in the Motif Atlas
- Geometric match to IL_4V88_447
- Geometric discrepancy: 0.285
- The information below is about IL_4V88_447
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_34780.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-cWW-cWW-cWW
- Number of instances in this motif group
- 1
Unit IDs
7UCK|1|9|G|1281
7UCK|1|9|A|1282
7UCK|1|9|C|1283
7UCK|1|9|A|1284
7UCK|1|9|G|1285
7UCK|1|9|G|1286
7UCK|1|9|A|1287
7UCK|1|9|U|1288
7UCK|1|9|U|1289
7UCK|1|9|G|1290
*
7UCK|1|9|C|1309
7UCK|1|9|U|1310
7UCK|1|9|C|1311
7UCK|1|9|G|1312
7UCK|1|9|A|1313
7UCK|1|9|U|1314
7UCK|1|9|U|1315
7UCK|1|9|C|1316
Current chains
- Chain 9
- 18S rRNA
Nearby chains
- Chain Dd
- 40S ribosomal protein S29
- Chain KK
- 40S ribosomal protein S10
Coloring options: