IL_7UG6_048
3D structure
- PDB id
- 7UG6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of pre-60S ribosomal subunit, unmethylated G2922
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GAGUG*CUC
- Length
- 8 nucleotides
- Bulged bases
- 7UG6|1|1|A|1263
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UG6_048 not in the Motif Atlas
- Geometric match to IL_1MMS_002
- Geometric discrepancy: 0.1567
- The information below is about IL_1MMS_002
- Detailed Annotation
- Major groove platform with extra cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_51387.2
- Basepair signature
- cWW-cSH-cWW-cWW
- Number of instances in this motif group
- 20
Unit IDs
7UG6|1|1|G|1262
7UG6|1|1|A|1263
7UG6|1|1|G|1264
7UG6|1|1|U|1265
7UG6|1|1|G|1266
*
7UG6|1|1|C|1275
7UG6|1|1|U|1276
7UG6|1|1|C|1277
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain W
- Ribosome assembly factor MRT4
- Chain q
- 60S ribosomal protein L12-A
- Chain r
- Ribosome biogenesis protein NSA2
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