3D structure

PDB id
7UG6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of pre-60S ribosomal subunit, unmethylated G2922
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
UUAUCA*UCUUAUG
Length
13 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7UG6_064 not in the Motif Atlas
Homologous match to IL_5TBW_072
Geometric discrepancy: 0.1151
The information below is about IL_5TBW_072
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_39753.2
Basepair signature
cWW-L-R-tWH-L-R-L-R-L-cWW
Number of instances in this motif group
2

Unit IDs

7UG6|1|1|U|1702
7UG6|1|1|U|1703
7UG6|1|1|A|1704
7UG6|1|1|U|1705
7UG6|1|1|C|1706
7UG6|1|1|A|1707
*
7UG6|1|1|U|1737
7UG6|1|1|C|1738
7UG6|1|1|U|1739
7UG6|1|1|U|1740
7UG6|1|1|A|1741
7UG6|1|1|U|1742
7UG6|1|1|G|1743

Current chains

Chain 1
25S rRNA

Nearby chains

Chain g
60S ribosomal protein L34-A

Coloring options:


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