3D structure

PDB id
7UG6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of pre-60S ribosomal subunit, unmethylated G2922
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
CC*GUUG
Length
6 nucleotides
Bulged bases
7UG6|1|1|U|3355
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7UG6_114 not in the Motif Atlas
Geometric match to IL_5TBW_136
Geometric discrepancy: 0.2236
The information below is about IL_5TBW_136
Detailed Annotation
Multiple bulged bases
Broad Annotation
No text annotation
Motif group
IL_82107.1
Basepair signature
cWW-cWW
Number of instances in this motif group
34

Unit IDs

7UG6|1|1|C|3349
7UG6|1|1|C|3350
*
7UG6|1|1|G|3353
7UG6|1|1|U|3354
7UG6|1|1|U|3355
7UG6|1|1|G|3356

Current chains

Chain 1
25S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


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