IL_7UG7_011

3D structure

PDB id

7UG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

GGAUAAC*GCUAAUAC

Length

15 nucleotides

Bulged bases

7UG7|1|16|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UG7_011 not in the Motif Atlas

Homologous match to IL_5J7L_012

Geometric discrepancy: 0.1119

The information below is about IL_5J7L_012

Detailed Annotation

tWH-tWH-tHW-tHW

Broad Annotation

No text annotation

Motif group

IL_80604.6

Basepair signature

cWW-cWW-tWH-tWH-tHW-tHW-cWW

Number of instances in this motif group

3

Unit IDs

7UG7|1|16|G|147
7UG7|1|16|G|148
7UG7|1|16|A|149
7UG7|1|16|U|150
7UG7|1|16|A|151
7UG7|1|16|A|152
7UG7|1|16|C|153
*
7UG7|1|16|G|168
7UG7|1|16|C|169
7UG7|1|16|U|170
7UG7|1|16|A|171
7UG7|1|16|A|172
7UG7|1|16|U|173
7UG7|1|16|A|174
7UG7|1|16|C|175

Current chains

Chain 16

16S rRNA

Nearby chains

Chain ST

30S ribosomal protein S20