IL_7UG7_022

3D structure

PDB id

7UG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

GAAGGG*CAUUGAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UG7_022 not in the Motif Atlas

Homologous match to IL_5J7L_023

Geometric discrepancy: 0.0922

The information below is about IL_5J7L_023

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_70801.1

Basepair signature

cWW-cWW-L-R-tWW-L-R-L-cWW

Number of instances in this motif group

1

Unit IDs

7UG7|1|16|G|450
7UG7|1|16|A|451
7UG7|1|16|A|452
7UG7|1|16|G|453
7UG7|1|16|G|454
7UG7|1|16|G|455
*
7UG7|1|16|C|477
7UG7|1|16|A|478
7UG7|1|16|U|479
7UG7|1|16|U|480
7UG7|1|16|G|481
7UG7|1|16|A|482
7UG7|1|16|C|483

Current chains

Chain 16

16S rRNA

Nearby chains

Chain SP

30S ribosomal protein S16