IL_7UG7_032

3D structure

PDB id

7UG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

UAGAG*UGGA

Length

9 nucleotides

Bulged bases

7UG7|1|16|A|665

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UG7_032 not in the Motif Atlas

Homologous match to IL_5J7L_033

Geometric discrepancy: 0.0641

The information below is about IL_5J7L_033

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_85033.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

35

Unit IDs

7UG7|1|16|U|662
7UG7|1|16|A|663
7UG7|1|16|G|664
7UG7|1|16|A|665
7UG7|1|16|G|666
*
7UG7|1|16|U|740
7UG7|1|16|G|741
7UG7|1|16|G|742
7UG7|1|16|A|743

Current chains

Chain 16

16S rRNA

Nearby chains

Chain SF

30S ribosomal protein S6

Chain SO

30S ribosomal protein S15

Chain SR

30S ribosomal protein S18