IL_7UG7_185
3D structure
- PDB id
- 7UG7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.58 Å
Loop
- Sequence
- (5MC)AC*GAAG
- Length
- 7 nucleotides
- Bulged bases
- 7UG7|1|16|A|1492, 7UG7|1|16|A|1493
- QA status
- Modified nucleotides: 5MC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UG7_185 not in the Motif Atlas
- Geometric match to IL_3C3Z_002
- Geometric discrepancy: 0.2496
- The information below is about IL_3C3Z_002
- Detailed Annotation
- Decoding loop related
- Broad Annotation
- Decoding loop related
- Motif group
- IL_29925.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
7UG7|1|16|5MC|1407
7UG7|1|16|A|1408
7UG7|1|16|C|1409
*
7UG7|1|16|G|1491
7UG7|1|16|A|1492
7UG7|1|16|A|1493
7UG7|1|16|G|1494
Current chains
- Chain 16
- 16S rRNA
Nearby chains
- Chain 23
- Large subunit ribosomal RNA; LSU rRNA
- Chain EF
- Elongation factor G
- Chain SL
- 30S ribosomal protein S12
- Chain mR
- mRNA
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