IL_7UG7_188

3D structure

PDB id

7UG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

GGAACUAGG*CUGUC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UG7_188 not in the Motif Atlas

Homologous match to IL_5J7L_386

Geometric discrepancy: 0.0447

The information below is about IL_5J7L_386

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_22854.4

Basepair signature

cWW-tSH-cWW-tHW-R-L-cWW-L-L-R

Number of instances in this motif group

7

Unit IDs

7UG7|1|23|G|1666
7UG7|1|23|G|1667
7UG7|1|23|A|1668
7UG7|1|23|A|1669
7UG7|1|23|C|1670
7UG7|1|23|U|1671
7UG7|1|23|A|1672
7UG7|1|23|G|1673
7UG7|1|23|G|1674
*
7UG7|1|23|C|1990
7UG7|1|23|U|1991
7UG7|1|23|G|1992
7UG7|1|23|U|1993
7UG7|1|23|C|1994

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LC

50S ribosomal protein L3

Chain LN

50S ribosomal protein L14