IL_7UG7_189

3D structure

PDB id

7UG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UG7_189 not in the Motif Atlas

Homologous match to IL_5J7L_387

Geometric discrepancy: 0.0676

The information below is about IL_5J7L_387

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61249.1

Basepair signature

cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW

Number of instances in this motif group

1

Unit IDs

7UG7|1|23|U|1851
7UG7|1|23|U|1852
7UG7|1|23|A|1853
7UG7|1|23|A|1854
7UG7|1|23|U|1855
7UG7|1|23|U|1856
7UG7|1|23|G|1857
7UG7|1|23|A|1858
7UG7|1|23|U|1859
7UG7|1|23|G|1860
*
7UG7|1|23|U|1882
7UG7|1|23|U|1883
7UG7|1|23|G|1884
7UG7|1|23|A|1885
7UG7|1|23|U|1886
7UG7|1|23|C|1887
7UG7|1|23|G|1888
7UG7|1|23|A|1889
7UG7|1|23|A|1890
7UG7|1|23|G|1891

Current chains

Chain 23

23S rRNA

Nearby chains

Chain Dt

Transfer RNA; tRNA

Chain LA

50S ribosomal protein L1