IL_7UG7_193

3D structure

PDB id

7UG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

GUGUAGGAUAG*CC

Length

13 nucleotides

Bulged bases

7UG7|1|23|G|2115, 7UG7|1|23|A|2119

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UG7_193 not in the Motif Atlas

Homologous match to IL_3U4M_002

Geometric discrepancy: 0.4561

The information below is about IL_3U4M_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_32056.1

Basepair signature

cWW-L-cWW-L-L-tWH-R-L-R-L

Number of instances in this motif group

3

Unit IDs

7UG7|1|23|G|2110
7UG7|1|23|U|2111
7UG7|1|23|G|2112
7UG7|1|23|U|2113
7UG7|1|23|A|2114
7UG7|1|23|G|2115
7UG7|1|23|G|2116
7UG7|1|23|A|2117
7UG7|1|23|U|2118
7UG7|1|23|A|2119
7UG7|1|23|G|2120
*
7UG7|1|23|C|2178
7UG7|1|23|C|2179

Current chains

Chain 23

23S rRNA

Nearby chains

Chain Dt

Transfer RNA; tRNA

Chain LA

50S ribosomal protein L1