IL_7UNR_094
3D structure
- PDB id
- 7UNR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- AUA*UGUUU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UNR_094 not in the Motif Atlas
- Geometric match to IL_5J7L_337
- Geometric discrepancy: 0.0954
- The information below is about IL_5J7L_337
- Detailed Annotation
- Major groove minor groove platform with extra cWW
- Broad Annotation
- Major groove minor groove platform with extra cWW
- Motif group
- IL_51387.2
- Basepair signature
- cWW-cSH-cWW-cWW
- Number of instances in this motif group
- 20
Unit IDs
7UNR|1|A|A|2446
7UNR|1|A|U|2447
7UNR|1|A|A|2448
*
7UNR|1|A|U|2476
7UNR|1|A|G|2477
7UNR|1|A|U|2478
7UNR|1|A|U|2479
7UNR|1|A|U|2480
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain O
- 50S ribosomal protein L16
Coloring options: