IL_7UNR_174

3D structure

PDB id

7UNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

7UNR|1|a|C|1394, 7UNR|1|a|A|1497

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UNR_174 not in the Motif Atlas

Geometric match to IL_4V88_463

Geometric discrepancy: 0.1147

The information below is about IL_4V88_463

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61438.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

5

Unit IDs

7UNR|1|a|C|1393
7UNR|1|a|C|1394
7UNR|1|a|G|1395
*
7UNR|1|a|C|1495
7UNR|1|a|A|1496
7UNR|1|a|A|1497
7UNR|1|a|G|1498

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain v

Transfer RNA; tRNA

Chain w

mRNA