IL_7UNU_009

3D structure

PDB id

7UNU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AUUG*CUUU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UNU_009 not in the Motif Atlas

Geometric match to IL_5C5W_003

Geometric discrepancy: 0.1905

The information below is about IL_5C5W_003

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_54697.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

52

Unit IDs

7UNU|1|A|A|279
7UNU|1|A|U|280
7UNU|1|A|U|281
7UNU|1|A|G|282
*
7UNU|1|A|C|346
7UNU|1|A|U|347
7UNU|1|A|U|348
7UNU|1|A|U|349

Current chains

Chain A

23S Ribosomal RNA

Nearby chains