IL_7UNU_019

3D structure

PDB id

7UNU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GC*GAC

Length

5 nucleotides

Bulged bases

7UNU|1|A|A|754

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UNU_019 not in the Motif Atlas

Geometric match to IL_4V9F_025

Geometric discrepancy: 0.0964

The information below is about IL_4V9F_025

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_14190.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

134

Unit IDs

7UNU|1|A|G|687
7UNU|1|A|C|688
*
7UNU|1|A|G|753
7UNU|1|A|A|754
7UNU|1|A|C|755

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2