IL_7UNU_053

3D structure

PDB id

7UNU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGAUG*CUAAG

Length

10 nucleotides

Bulged bases

7UNU|1|A|U|1407

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UNU_053 not in the Motif Atlas

Geometric match to IL_5J7L_295

Geometric discrepancy: 0.1095

The information below is about IL_5J7L_295

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_38507.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

16

Unit IDs

7UNU|1|A|C|1404
7UNU|1|A|G|1405
7UNU|1|A|A|1406
7UNU|1|A|U|1407
7UNU|1|A|G|1408
*
7UNU|1|A|C|1567
7UNU|1|A|U|1568
7UNU|1|A|A|1569
7UNU|1|A|A|1570
7UNU|1|A|G|1571

Current chains

Chain A

23S Ribosomal RNA

Nearby chains