IL_7UNU_094
3D structure
- PDB id
- 7UNU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CCAAG*CGACG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UNU_094 not in the Motif Atlas
- Geometric match to IL_5J7L_338
- Geometric discrepancy: 0.0824
- The information below is about IL_5J7L_338
- Detailed Annotation
- Double sheared with non-canonical cWW
- Broad Annotation
- Double sheared
- Motif group
- IL_17948.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
7UNU|1|A|C|2453
7UNU|1|A|C|2454
7UNU|1|A|A|2455
7UNU|1|A|A|2456
7UNU|1|A|G|2457
*
7UNU|1|A|C|2467
7UNU|1|A|G|2468
7UNU|1|A|A|2469
7UNU|1|A|C|2470
7UNU|1|A|G|2471
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 8
- 50S ribosomal protein L36
- Chain O
- 50S ribosomal protein L16
- Chain x
- Translation initiation factor IF-2
Coloring options: