IL_7UNV_114
3D structure
- PDB id
- 7UNV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CGAUGGUAG*UGAGAGUAG
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UNV_114 not in the Motif Atlas
- Homologous match to IL_7RQB_115
- Geometric discrepancy: 0.0777
- The information below is about IL_7RQB_115
- Detailed Annotation
- Bacterial 5S Loop E
- Broad Annotation
- Loop E
- Motif group
- IL_56455.3
- Basepair signature
- cWW-tSH-tHW-L-R-L-R-L-R-tWH-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
7UNV|1|B|C|71
7UNV|1|B|G|72
7UNV|1|B|A|73
7UNV|1|B|U|74
7UNV|1|B|G|75
7UNV|1|B|G|76
7UNV|1|B|U|77
7UNV|1|B|A|78
7UNV|1|B|G|79
*
7UNV|1|B|U|97
7UNV|1|B|G|98
7UNV|1|B|A|99
7UNV|1|B|G|100
7UNV|1|B|A|101
7UNV|1|B|G|102
7UNV|1|B|U|103
7UNV|1|B|A|104
7UNV|1|B|G|105
Current chains
- Chain B
- 5S Ribosomal RNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain O
- 50S ribosomal protein L16
- Chain X
- 50S ribosomal protein L25
Coloring options: