3D structure

PDB id
7UNV (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.7 Å

Loop

Sequence
GCUGCAU*AUG(2MG)C
Length
12 nucleotides
Bulged bases
7UNV|1|a|C|1048
QA status
Modified nucleotides: 2MG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7UNV_160 not in the Motif Atlas
Homologous match to IL_5J7L_047
Geometric discrepancy: 0.2214
The information below is about IL_5J7L_047
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7UNV|1|a|G|1044
7UNV|1|a|C|1045
7UNV|1|a|U|1046
7UNV|1|a|G|1047
7UNV|1|a|C|1048
7UNV|1|a|A|1049
7UNV|1|a|U|1050
*
7UNV|1|a|A|1198
7UNV|1|a|U|1199
7UNV|1|a|G|1200
7UNV|1|a|2MG|1201
7UNV|1|a|C|1202

Current chains

Chain a
16S Ribosomal RNA

Nearby chains

Chain c
30S ribosomal protein S3
Chain j
30S ribosomal protein S10
Chain n
30S ribosomal protein S14

Coloring options:


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