3D structure

PDB id
7UNW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.6 Å

Loop

Sequence
GGGAG*CUUUGAUC
Length
13 nucleotides
Bulged bases
7UNW|1|A|U|101
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7UNW_004 not in the Motif Atlas
Geometric match to IL_6UFG_001
Geometric discrepancy: 0.1597
The information below is about IL_6UFG_001
Detailed Annotation
Kink-turn
Broad Annotation
No text annotation
Motif group
IL_01488.3
Basepair signature
cWW-tSS-tSH-L-R-tHS-L-cWW
Number of instances in this motif group
10

Unit IDs

7UNW|1|A|G|81
7UNW|1|A|G|82
7UNW|1|A|G|83
7UNW|1|A|A|84
7UNW|1|A|G|85
*
7UNW|1|A|C|98
7UNW|1|A|U|99
7UNW|1|A|U|100
7UNW|1|A|U|101
7UNW|1|A|G|102
7UNW|1|A|A|103
7UNW|1|A|U|104
7UNW|1|A|C|105

Current chains

Chain A
23S Ribosomal RNA

Nearby chains

Chain 1
50S ribosomal protein L29
Chain W
50S ribosomal protein L24

Coloring options:


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