IL_7UNW_009

3D structure

PDB id

7UNW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

AUUG*CUUU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UNW_009 not in the Motif Atlas

Geometric match to IL_3R2D_002

Geometric discrepancy: 0.1407

The information below is about IL_3R2D_002

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_77658.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

34

Unit IDs

7UNW|1|A|A|279
7UNW|1|A|U|280
7UNW|1|A|U|281
7UNW|1|A|G|282
*
7UNW|1|A|C|346
7UNW|1|A|U|347
7UNW|1|A|U|348
7UNW|1|A|U|349

Current chains

Chain A

23S Ribosomal RNA

Nearby chains