IL_7UNW_035
3D structure
- PDB id
- 7UNW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- UCCCAAAG*CA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UNW_035 not in the Motif Atlas
- Geometric match to IL_5J7L_278
- Geometric discrepancy: 0.0761
- The information below is about IL_5J7L_278
- Detailed Annotation
- SSU/LSU pseudoknot
- Broad Annotation
- No text annotation
- Motif group
- IL_41203.4
- Basepair signature
- cWW-L-cWW-L-L-R-cSH
- Number of instances in this motif group
- 11
Unit IDs
7UNW|1|A|U|994
7UNW|1|A|C|995
7UNW|1|A|C|996
7UNW|1|A|C|997
7UNW|1|A|A|998
7UNW|1|A|A|999
7UNW|1|A|A|1000
7UNW|1|A|G|1001
*
7UNW|1|A|C|1141
7UNW|1|A|A|1142
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain L
- 50S ribosomal protein L13
- Chain S
- 50S ribosomal protein L20
Coloring options: