IL_7UNW_084
3D structure
- PDB id
- 7UNW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GCCUG*CAUGC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UNW_084 not in the Motif Atlas
- Geometric match to IL_5BTM_001
- Geometric discrepancy: 0.3877
- The information below is about IL_5BTM_001
- Detailed Annotation
- Triple non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_49751.4
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
7UNW|1|A|G|2089
7UNW|1|A|C|2090
7UNW|1|A|C|2091
7UNW|1|A|U|2092
7UNW|1|A|G|2093
*
7UNW|1|A|C|2170
7UNW|1|A|A|2171
7UNW|1|A|U|2172
7UNW|1|A|G|2173
7UNW|1|A|C|2174
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: