3D structure

PDB id
7UNW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.6 Å

Loop

Sequence
CCUCU*AUG
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7UNW_102 not in the Motif Atlas
Geometric match to IL_7RQB_104
Geometric discrepancy: 0.088
The information below is about IL_7RQB_104
Detailed Annotation
C-loop
Broad Annotation
No text annotation
Motif group
IL_63596.6
Basepair signature
cWW-cWS-cSH-tWH-cWW-L
Number of instances in this motif group
14

Unit IDs

7UNW|1|A|C|2667
7UNW|1|A|C|2668
7UNW|1|A|U|2669
7UNW|1|A|C|2670
7UNW|1|A|U|2671
*
7UNW|1|A|A|2712
7UNW|1|A|U|2713
7UNW|1|A|G|2714

Current chains

Chain A
23S Ribosomal RNA

Nearby chains

Chain D
50S ribosomal protein L3
Chain M
50S ribosomal protein L14
Chain R
50S ribosomal protein L19

Coloring options:


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