IL_7UPH_002
3D structure
- PDB id
- 7UPH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a ribosome with tethered subunits
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.18 Å
Loop
- Sequence
- AG*CAU
- Length
- 5 nucleotides
- Bulged bases
- 7UPH|1|I|A|396
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UPH_002 not in the Motif Atlas
- Homologous match to IL_5J7L_002
- Geometric discrepancy: 0.2699
- The information below is about IL_5J7L_002
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.6
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 130
Unit IDs
7UPH|1|I|A|43
7UPH|1|I|G|44
*
7UPH|1|I|C|395
7UPH|1|I|A|396
7UPH|1|I|U|397
Current chains
- Chain I
- Tethered rRNA
Nearby chains
- Chain C
- 30S ribosomal protein S16
Coloring options: