IL_7UPH_027
3D structure
- PDB id
- 7UPH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a ribosome with tethered subunits
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.18 Å
Loop
- Sequence
- UAA*UG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UPH_027 not in the Motif Atlas
- Homologous match to IL_4LFB_024
- Geometric discrepancy: 0.3809
- The information below is about IL_4LFB_024
- Detailed Annotation
- Major groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_48076.6
- Basepair signature
- cWW-cSH-cWW
- Number of instances in this motif group
- 41
Unit IDs
7UPH|1|I|U|593
7UPH|1|I|A|594
7UPH|1|I|A|595
*
7UPH|1|I|U|643
7UPH|1|I|G|644
Current chains
- Chain I
- Tethered rRNA
Nearby chains
- Chain D
- 30S ribosomal protein S17
- Chain c
- 30S ribosomal protein S8
Coloring options: