IL_7UPH_043

3D structure

PDB id

7UPH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a ribosome with tethered subunits

Experimental method

ELECTRON MICROSCOPY

Resolution

4.18 Å

Loop

Sequence

GGAAG*UGUGCCUUCGGGAACC

Length

21 nucleotides

Bulged bases

7UPH|1|I|U|1024, 7UPH|1|I|U|1029, 7UPH|1|I|C|1030

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7UPH|1|I|G|1001
7UPH|1|I|G|1002
7UPH|1|I|A|1003
7UPH|1|I|A|1004
7UPH|1|I|G|1005
*
7UPH|1|I|U|1022
7UPH|1|I|G|1023
7UPH|1|I|U|1024
7UPH|1|I|G|1025
7UPH|1|I|C|1026
7UPH|1|I|C|1027
7UPH|1|I|U|1028
7UPH|1|I|U|1029
7UPH|1|I|C|1030
7UPH|1|I|G|1031
7UPH|1|I|G|1032
7UPH|1|I|G|1033
7UPH|1|I|A|1034
7UPH|1|I|A|1035
7UPH|1|I|C|1036
7UPH|1|I|C|1037

Current chains

Chain I

Tethered rRNA

Nearby chains

Chain A

30S ribosomal protein S14