3D structure

PDB id
7UPH (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of a ribosome with tethered subunits
Experimental method
ELECTRON MICROSCOPY
Resolution
4.18 Å

Loop

Sequence
GUG*CC
Length
5 nucleotides
Bulged bases
7UPH|1|I|U|1048
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7UPH_044 not in the Motif Atlas
Homologous match to IL_6CZR_152
Geometric discrepancy: 0.3245
The information below is about IL_6CZR_152
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7UPH|1|I|G|1047
7UPH|1|I|U|1048
7UPH|1|I|G|1049
*
7UPH|1|I|C|1207
7UPH|1|I|C|1208

Current chains

Chain I
Tethered rRNA

Nearby chains

Chain A
30S ribosomal protein S14

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.374 s