IL_7UPH_048
3D structure
- PDB id
- 7UPH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a ribosome with tethered subunits
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.18 Å
Loop
- Sequence
- GUC*GUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UPH_048 not in the Motif Atlas
- Geometric match to IL_5J7L_050
- Geometric discrepancy: 0.2616
- The information below is about IL_5J7L_050
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_28037.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 65
Unit IDs
7UPH|1|I|G|1060
7UPH|1|I|U|1061
7UPH|1|I|C|1062
*
7UPH|1|I|G|1192
7UPH|1|I|U|1193
7UPH|1|I|C|1194
Current chains
- Chain I
- Tethered rRNA
Nearby chains
- Chain A
- 30S ribosomal protein S14
- Chain X
- 30S ribosomal protein S3
- Chain Z
- 30S ribosomal protein S5
- Chain e
- 30S ribosomal protein S10
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