IL_7UPH_063

3D structure

PDB id

7UPH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a ribosome with tethered subunits

Experimental method

ELECTRON MICROSCOPY

Resolution

4.18 Å

Loop

Sequence

CAGUCAAUAAG*CGACCUUCGG

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7UPH|1|I|C|1448
7UPH|1|I|A|1449
7UPH|1|I|G|1450
7UPH|1|I|U|1451
7UPH|1|I|C|1452
7UPH|1|I|A|1453
7UPH|1|I|A|1454
7UPH|1|I|U|1455
7UPH|1|I|A|1456
7UPH|1|I|A|1457
7UPH|1|I|G|1458
*
7UPH|1|I|C|4349
7UPH|1|I|G|4350
7UPH|1|I|A|4351
7UPH|1|I|C|4352
7UPH|1|I|C|4353
7UPH|1|I|U|4354
7UPH|1|I|U|4355
7UPH|1|I|C|4356
7UPH|1|I|G|4357
7UPH|1|I|G|4358

Current chains

Chain I

Tethered rRNA

Nearby chains

Chain G

30S ribosomal protein S20

Chain o

50S ribosomal protein L19