IL_7UPH_095
3D structure
- PDB id
- 7UPH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a ribosome with tethered subunits
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.18 Å
Loop
- Sequence
- GCAAG*CAACC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UPH_095 not in the Motif Atlas
- Geometric match to IL_5J7L_274
- Geometric discrepancy: 0.2845
- The information below is about IL_5J7L_274
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_17948.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
7UPH|1|I|G|2375
7UPH|1|I|C|2376
7UPH|1|I|A|2377
7UPH|1|I|A|2378
7UPH|1|I|G|2379
*
7UPH|1|I|C|2392
7UPH|1|I|A|2393
7UPH|1|I|A|2394
7UPH|1|I|C|2395
7UPH|1|I|C|2396
Current chains
- Chain I
- Tethered rRNA
Nearby chains
- Chain U
- 50S ribosomal protein L16
Coloring options: