IL_7UPH_153

3D structure

PDB id

7UPH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a ribosome with tethered subunits

Experimental method

ELECTRON MICROSCOPY

Resolution

4.18 Å

Loop

Sequence

GUUG*UGC

Length

7 nucleotides

Bulged bases

7UPH|1|I|U|3697

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UPH_153 not in the Motif Atlas

Geometric match to IL_7RQB_083

Geometric discrepancy: 0.2766

The information below is about IL_7RQB_083

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

270

Unit IDs

7UPH|1|I|G|3695
7UPH|1|I|U|3696
7UPH|1|I|U|3697
7UPH|1|I|G|3698
*
7UPH|1|I|U|3714
7UPH|1|I|G|3715
7UPH|1|I|C|3716

Current chains

Chain I

Tethered rRNA

Nearby chains

Chain K

50S ribosomal protein L2

Chain w

50S ribosomal protein L28