IL_7UPH_173

3D structure

PDB id

7UPH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a ribosome with tethered subunits

Experimental method

ELECTRON MICROSCOPY

Resolution

4.18 Å

Loop

Sequence

CGC*GUAG

Length

7 nucleotides

Bulged bases

7UPH|1|J|A|65

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UPH_173 not in the Motif Atlas

Geometric match to IL_1MZP_001

Geometric discrepancy: 0.3412

The information below is about IL_1MZP_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_28037.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

65

Unit IDs

7UPH|1|J|C|16
7UPH|1|J|G|17
7UPH|1|J|C|18
*
7UPH|1|J|G|63
7UPH|1|J|U|64
7UPH|1|J|A|65
7UPH|1|J|G|66

Current chains

Chain J

5S rRNA

Nearby chains