3D structure

PDB id
7UPH (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of a ribosome with tethered subunits
Experimental method
ELECTRON MICROSCOPY
Resolution
4.18 Å

Loop

Sequence
CAUACAAAG*CAUAAAGUG
Length
18 nucleotides
Bulged bases
7UPH|1|I|U|1285
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7UPH|1|I|C|1244
7UPH|1|I|A|1245
7UPH|1|I|U|1246
7UPH|1|I|A|1247
7UPH|1|I|C|1248
7UPH|1|I|A|1249
7UPH|1|I|A|1250
7UPH|1|I|A|1251
7UPH|1|I|G|1252
*
7UPH|1|I|C|1283
7UPH|1|I|A|1284
7UPH|1|I|U|1285
7UPH|1|I|A|1286
7UPH|1|I|A|1287
7UPH|1|I|A|1288
7UPH|1|I|G|1289
7UPH|1|I|U|1290
7UPH|1|I|G|1291

Current chains

Chain I
Tethered rRNA

Nearby chains

Chain A
30S ribosomal protein S14
Chain b
30S ribosomal protein S7
Chain d
30S ribosomal protein S9
Chain e
30S ribosomal protein S10
Chain h
30S ribosomal protein S13

Coloring options:

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