IL_7UPH_199

3D structure

PDB id

7UPH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a ribosome with tethered subunits

Experimental method

ELECTRON MICROSCOPY

Resolution

4.18 Å

Loop

Sequence

GCCCAGACAG*UCGAGU

Length

16 nucleotides

Bulged bases

7UPH|1|I|A|2540

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7UPH|1|I|G|2536
7UPH|1|I|C|2537
7UPH|1|I|C|2538
7UPH|1|I|C|2539
7UPH|1|I|A|2540
7UPH|1|I|G|2541
7UPH|1|I|A|2542
7UPH|1|I|C|2543
7UPH|1|I|A|2544
7UPH|1|I|G|2545
*
7UPH|1|I|U|2602
7UPH|1|I|C|2603
7UPH|1|I|G|2604
7UPH|1|I|A|2605
7UPH|1|I|G|2606
7UPH|1|I|U|2607

Current chains

Chain I

Tethered rRNA

Nearby chains

Chain O

50S ribosomal protein L6