IL_7UVV_120

3D structure

PDB id

7UVV (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome-Streptothricin-F complex: 70S with P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GGACAAC*GCUAAUAC

Length

15 nucleotides

Bulged bases

7UVV|1|a|U|169

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UVV_120 not in the Motif Atlas

Homologous match to IL_5J7L_012

Geometric discrepancy: 0.1255

The information below is about IL_5J7L_012

Detailed Annotation

tWH-tWH-tHW-tHW

Broad Annotation

No text annotation

Motif group

IL_80604.6

Basepair signature

cWW-cWW-tWH-tWH-tHW-tHW-cWW

Number of instances in this motif group

3

Unit IDs

7UVV|1|a|G|143
7UVV|1|a|G|144
7UVV|1|a|A|145
7UVV|1|a|C|146
7UVV|1|a|A|147
7UVV|1|a|A|148
7UVV|1|a|C|149
*
7UVV|1|a|G|164
7UVV|1|a|C|165
7UVV|1|a|U|166
7UVV|1|a|A|167
7UVV|1|a|A|168
7UVV|1|a|U|169
7UVV|1|a|A|170
7UVV|1|a|C|171

Current chains

Chain a

16s Ribosomal RNA

Nearby chains

Chain t

30S ribosomal protein S20