IL_7UVW_025

3D structure

PDB id

7UVW (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.37 Å

Loop

Sequence

ACGAA*UAU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UVW_025 not in the Motif Atlas

Geometric match to IL_5J7L_332

Geometric discrepancy: 0.3281

The information below is about IL_5J7L_332

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61476.2

Basepair signature

cWW-tSH-L-cWW-L

Number of instances in this motif group

7

Unit IDs

7UVW|1|A|A|841
7UVW|1|A|C|842
7UVW|1|A|G|843
7UVW|1|A|A|844
7UVW|1|A|A|845
*
7UVW|1|A|U|930
7UVW|1|A|A|931
7UVW|1|A|U|932

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain Y

50S ribosomal protein L30