IL_7UVW_081

3D structure

PDB id

7UVW (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.37 Å

Loop

Sequence

CAG*CGUAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UVW_081 not in the Motif Atlas

Geometric match to IL_4V9F_072

Geometric discrepancy: 0.3534

The information below is about IL_4V9F_072

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_75527.3

Basepair signature

cWW-cWW-cSH-cWW

Number of instances in this motif group

12

Unit IDs

7UVW|1|A|C|2293
7UVW|1|A|A|2294
7UVW|1|A|G|2295
*
7UVW|1|A|C|2313
7UVW|1|A|G|2314
7UVW|1|A|U|2315
7UVW|1|A|A|2316
7UVW|1|A|G|2317

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain B

5S ribosomal RNA; 5S rRNA

Chain F

50S ribosomal protein L5

Chain N

50S ribosomal protein L18