IL_7UVY_119

3D structure

PDB id

7UVY (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome-Streptothricin-D complex: 70S with P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.39 Å

Loop

Sequence

GGACAAC*GCUAAUAC

Length

15 nucleotides

Bulged bases

7UVY|1|a|U|169

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UVY_119 not in the Motif Atlas

Homologous match to IL_5J7L_012

Geometric discrepancy: 0.1139

The information below is about IL_5J7L_012

Detailed Annotation

tWH-tWH-tHW-tHW

Broad Annotation

No text annotation

Motif group

IL_80604.6

Basepair signature

cWW-cWW-tWH-tWH-tHW-tHW-cWW

Number of instances in this motif group

3

Unit IDs

7UVY|1|a|G|143
7UVY|1|a|G|144
7UVY|1|a|A|145
7UVY|1|a|C|146
7UVY|1|a|A|147
7UVY|1|a|A|148
7UVY|1|a|C|149
*
7UVY|1|a|G|164
7UVY|1|a|C|165
7UVY|1|a|U|166
7UVY|1|a|A|167
7UVY|1|a|A|168
7UVY|1|a|U|169
7UVY|1|a|A|170
7UVY|1|a|C|171

Current chains

Chain a

16s Ribosomal RNA

Nearby chains

Chain t

30S ribosomal protein S20